IBMC

BLAST DataBase Manager

Graphical user interface that allows you to create high quality sequence datasets using the tools included. Using these tools you can perform several common tasks such as doing BLAST alignments, getting the open reading frames of the sequences in a Fasta file or changing the format of a Fasta file. All these task make use of several known tools such as EMBOSS, bedtools, and NCBI's BLAST, Splign and Compart.

ADOPS

Tool for detecting positively selected amino acid sites from a set of unaligned nucleotide sequence data.

SEDA

SEDA (SEquence DAtaset builder) is an open source application for processing FASTA files containing DNA and protein sequences.

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