IBMC

BLAST DataBase Manager

  • Posted on: 22 May 2018
  • By: dsobral

Graphical user interface that allows you to create high quality sequence datasets using the tools included. Using these tools you can perform several common tasks such as doing BLAST alignments, getting the open reading frames of the sequences in a Fasta file or changing the format of a Fasta file. All these task make use of several known tools such as EMBOSS, bedtools, and NCBI's BLAST, Splign and Compart.

ADOPS

  • Posted on: 22 May 2018
  • By: dsobral

Tool for detecting positively selected amino acid sites from a set of unaligned nucleotide sequence data.

SEDA

  • Posted on: 22 May 2018
  • By: dsobral

SEDA (SEquence DAtaset builder) is an open source application for processing FASTA files containing DNA and protein sequences.